All code, data, and other necessary files needed to reproduce these analyses and figures can be found on my CaribbeanSST GitHub repository. Dropbox links are also provided for large files (netCDF/shape) for download within the Rmarkdown code

Figure 1 | Map of reefs included in SST analyses specific to reef locations. Reef shape files were obtained from the UN Environment World Conservation Monitoring Centre.


Session Information

Last update was 2020-07-31

## R version 3.5.1 (2018-07-02)
## Platform: x86_64-apple-darwin15.6.0 (64-bit)
## Running under: macOS High Sierra 10.13.6
## 
## Matrix products: default
## BLAS: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRblas.0.dylib
## LAPACK: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRlapack.dylib
## 
## locale:
## [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
## 
## attached base packages:
## [1] grid      stats     graphics  grDevices utils     datasets  methods  
## [8] base     
## 
## other attached packages:
##  [1] repmis_0.5         plotly_4.9.0       gganimate_1.0.6   
##  [4] fields_10.3        maps_3.3.0         spam_2.2-2        
##  [7] dotCall64_1.0-0    RColorBrewer_1.1-2 xts_0.12-0        
## [10] zoo_1.8-6          forcats_0.4.0      stringr_1.4.0     
## [13] dplyr_0.8.3        purrr_0.3.3        readr_1.3.1       
## [16] tidyr_1.0.0        tibble_2.1.3       tidyverse_1.3.0   
## [19] ggplot2_3.2.1      rgdal_1.4-4        maptools_0.9-5    
## [22] raster_2.9-23      sp_1.3-1           ncdf4_1.16.1      
## [25] sf_0.7-4          
## 
## loaded via a namespace (and not attached):
##  [1] nlme_3.1-140          fs_1.3.1              lubridate_1.7.4      
##  [4] progress_1.2.2        httr_1.4.1            R.cache_0.14.0       
##  [7] tools_3.5.1           backports_1.1.5       R6_2.4.1             
## [10] KernSmooth_2.23-15    mgcv_1.8-28           rgeos_0.4-3          
## [13] DBI_1.0.0             lazyeval_0.2.2        colorspace_1.4-1     
## [16] withr_2.1.2           tidyselect_0.2.5      prettyunits_1.0.2    
## [19] compiler_3.5.1        cli_2.0.1             rvest_0.3.5          
## [22] Cairo_1.5-10          xml2_1.2.2            labeling_0.3         
## [25] scales_1.1.0          classInt_0.3-3        digest_0.6.23        
## [28] foreign_0.8-71        R.utils_2.9.2         rmarkdown_1.16       
## [31] pkgconfig_2.0.3       htmltools_0.4.0       fastmap_1.0.1        
## [34] dbplyr_1.4.2          htmlwidgets_1.3       rlang_0.4.2          
## [37] readxl_1.3.1          rstudioapi_0.10       shiny_1.4.0          
## [40] generics_0.0.2        farver_2.0.1          jsonlite_1.6         
## [43] crosstalk_1.0.0       R.oo_1.23.0           magrittr_1.5         
## [46] Matrix_1.2-17         Rcpp_1.0.3            munsell_0.5.0        
## [49] fansi_0.4.1           lifecycle_0.1.0       R.methodsS3_1.8.0    
## [52] stringi_1.4.5         yaml_2.2.0            plyr_1.8.5           
## [55] promises_1.1.0        crayon_1.3.4          lattice_0.20-41      
## [58] splines_3.5.1         haven_2.2.0           transformr_0.1.2.9000
## [61] hms_0.5.3             magick_2.2            zeallot_0.1.0        
## [64] knitr_1.25            pillar_1.4.3          lpSolve_5.6.15       
## [67] codetools_0.2-16      reprex_0.3.0          glue_1.3.1           
## [70] evaluate_0.14         data.table_1.12.2     modelr_0.1.5         
## [73] httpuv_1.5.2          vctrs_0.2.1           tweenr_1.0.1         
## [76] cellranger_1.1.0      gtable_0.3.0          assertthat_0.2.1     
## [79] xfun_0.8              mime_0.7              xtable_1.8-4         
## [82] broom_0.5.2           e1071_1.7-2           later_1.0.0          
## [85] class_7.3-15          viridisLite_0.3.0     units_0.6-3          
## [88] ellipsis_0.3.0